BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F10LP1|AL427358
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 1917 0.0
>3x_Contig1693
Length = 15531
Score = 1917 bits (965), Expect = 0.0
Identities = 975/979 (99%), Gaps = 1/979 (0%)
Strand = Plus / Minus
Query: 1 gatctcccaatcagtttctaggattttcttaccagtttgactaccttaatggcggtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 gatctcccaatcagtttctaggattttcttaccagtttgactaccttaatggcggtggtg 6649
Query: 61 ccagtwtgcattagtaaaggaaaaaaaaaaaaaagatggtgacaattcttaacaaccact 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6648 ccagtatgcattagtaaaggaaaaaaaaaaaaaagatggtgacaattcttaacaaccact 6589
Query: 121 tgtctcattccgggcaccgattaacgactgtytgttggtcccgcagtcactgtgcttcgc 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6588 tgtctcattccgggcaccgattaacgactgtctgttggtcccgcagtcactgtgcttcgc 6529
Query: 181 ttcgtatcatcatgacagattatagtgttattgtcattggagcgggaatctctgggttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 ttcgtatcatcatgacagattatagtgttattgtcattggagcgggaatctctgggttaa 6469
Query: 241 aagctaccagcgatctggtcaagagtggtatagaatcggtgatttgcatcgaatcacgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 aagctaccagcgatctggtcaagagtggtatagaatcggtgatttgcatcgaatcacgtg 6409
Query: 301 atcgtgtcggaggtaggctgaataccagacaaggtcgcaatggcaagtacgatattggcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 atcgtgtcggaggtaggctgaataccagacaaggtcgcaatggcaagtacgatattggcg 6349
Query: 361 ggtcttggcatcacgatactttgagcaatggtttgtttatggaagaaatgtcgttgcccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6348 ggtcttggcatcacgatactttgagcaatggtttgtttatggaagaaatgtcgttgcccg 6289
Query: 421 agagcgaaagggcagggtttgtattcgatgatgaggacagggcatgcctcgttgataaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6288 agagcgaaagggcagggtttgtattcgatgatgaggacagggcatgcctcgttgataaaa 6229
Query: 481 aattaggagttcttgaagtggatcagttggaatgtttagcatatgaatttgagaaatggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6228 aattaggagttcttgaagtggatcagttggaatgtttagcatatgaatttgagaaatggg 6169
Query: 541 tcgagatgagatattatgattcacttgacgtagaagacgtgtcttattttcaactttgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6168 tcgagatgagatattatgattcacttgacgtagaagacgtgtcttattttcaactttgta 6109
Query: 601 tcgaattctgtttcagtagaaaagaatttttgaccgatgaacagctctaccatttaccac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 tcgaattctgtttcagtagaaaagaatttttgaccgatgaacagctctaccatttaccac 6049
Query: 661 aattgttaagatacatggaattgtggcatggtgttgattggtatgcactaagtgggaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 aattgttaagatacatggaattgtggcatggtgttgattggtatgcactaagtgggaagt 5989
Query: 721 ggtctgggattgaacacaatggaagaaatgcgttagttttacactatgacaaaattttgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 ggtctgggattgaacacaatggaagaaatgcgttagttttacactatgacaaaattttgg 5929
Query: 781 ctagaatttcgaatccagtcaaggataagatccatttgagcgaatctgtgaacctgatta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 ctagaatttcgaatccagtcaaggataagatccatttgagcgaatctgtgaacctgatta 5869
Query: 841 agaaattgtcaaatgggaaatatcaagtcaacactgacaagggtaaatatttgtgtgatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5868 agaaattgtcaaatgggaaatatcaagtcaacactgacaagggtaaatatttgtgtgatt 5809
Query: 901 attgcattgtaacagtaccacaatctgtgttggccatatcttgtgagcmggaggag-atg 959
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 5808 attgcattgtaacagtaccacaatctgtgttggccatatcttgtgagcaggaggagaatg 5749
Query: 960 aattttctcatatgaggaa 978
|||||||||||||||||||
Sbjct: 5748 aattttctcatatgaggaa 5730
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,542
Number of Sequences: 1807
Number of extensions: 15542
Number of successful extensions: 369
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)